PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011100937.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 184aa    MW: 20779 Da    PI: 6.514
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011100937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.5e-31122180159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYG+K+vk+s++pr+YYrC+ +gCpvkk+ver +edp++v++tYeg Hnh+
  XP_011100937.1 122 LDDGFKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERYKEDPRYVVTTYEGIHNHQ 180
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-32108182IPR003657WRKY domain
SuperFamilySSF1182901.96E-28115182IPR003657WRKY domain
PROSITE profilePS5081131.25117182IPR003657WRKY domain
SMARTSM007744.8E-35122181IPR003657WRKY domain
PfamPF031063.6E-24123180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MHTQLMIMAD YDPNTNMPGD GFGSEHDAPV AAPHDINFQV SDFFEFSDWI EENPAFSSIP  60
AGYNSQNPNY TPHVIVANST GISSSSSSFS EGTINRDSGS GREKKEIKDK VAFKTKSEVE  120
VLDDGFKWRK YGKKMVKNSP NPRNYYRCSV EGCPVKKRVE RYKEDPRYVV TTYEGIHNHQ  180
GPQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-26112182777Probable WRKY transcription factor 4
2lex_A4e-26112182777Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011100937.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100937.11e-137probable WRKY transcription factor 50
TrEMBLA0A2G9HW233e-76A0A2G9HW23_9LAMI; Uncharacterized protein
STRINGMigut.E01579.1.p6e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.19e-42WRKY DNA-binding protein 50