PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101099.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 215aa    MW: 23755.4 Da    PI: 4.8397
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-18130180255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+      r++lg+++t  +Aa+a++ a+ k++g
  XP_011101099.1 130 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYDTDVDAARAYDCAAFKMRG 180
                     7********.**********8542..4**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.2E-32129189IPR001471AP2/ERF domain
PfamPF008473.5E-13130180IPR001471AP2/ERF domain
SMARTSM003805.6E-36130194IPR001471AP2/ERF domain
PROSITE profilePS5103224.513130188IPR001471AP2/ERF domain
CDDcd000182.43E-29130188No hitNo description
SuperFamilySSF541715.1E-23130189IPR016177DNA-binding domain
PRINTSPR003674.3E-13131142IPR001471AP2/ERF domain
PRINTSPR003674.3E-13170190IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:1902074Biological Processresponse to salt
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
METSDESLTL EFIRHHLLED FTSADSFFDN LTTLCFSDVY GDKPIWSPGE LESPSSSGPT  60
PLPDSPISQY FAFSPDLFEF ETKPQISMST TDTQDDPSFP ESPEAPVKAE PEFTELVTGS  120
GVTLLAAGRH YRGVRRRPWG KYAAEIRDPT RKGSRVWLGT YDTDVDAARA YDCAAFKMRG  180
RKAILNFPLD AGKPPPAANA GRKRRRPDGC ATPSP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-28126189164ATERF1
3gcc_A5e-28126189164ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201205RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101099.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101099.11e-157ethylene-responsive transcription factor ERF107
TrEMBLA0A2G9G6792e-78A0A2G9G679_9LAMI; Uncharacterized protein
STRINGMigut.F00526.1.p5e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-44ERF family protein