PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101193.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 206aa    MW: 23438.8 Da    PI: 10.4876
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44.1e-113990254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    +  h e+Er+RR+++ +    Lr+llP+     +++K s  +  ++A +YIk++
  XP_011101193.1 39 KYVHRENERQRRQEMANLCGSLRTLLPPeY--ITKGKRSMPDLMQQAANYIKYM 90
                    667*************************66..79******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.4743790IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.07E-1138107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-1038107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.15E-63895No hitNo description
PfamPF000103.0E-83990IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-44396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MGAGVNPTTS TSNGRPRLRP APSRVHEEET NIGVINVRKY VHRENERQRR QEMANLCGSL  60
RTLLPPEYIT KGKRSMPDLM QQAANYIKYM RKNIQQLKTR KDELIMRKGV NSDNISRENL  120
PNNCVRVNPC PGGVEILIDT SFEDGQGFPL SRVLKELRQT GLDVVSCVST RANQKTLHRI  180
QSEARRTYSS EDLAALRERL SQLPIL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101193.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101193.21e-150transcription factor bHLH118-like
TrEMBLA0A2G9H1D34e-66A0A2G9H1D3_9LAMI; Uncharacterized protein
STRINGXP_009587651.15e-39(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.12e-31bHLH family protein