PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101388.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Trihelix
Protein Properties Length: 301aa    MW: 34501.8 Da    PI: 5.8582
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.41.4e-1625115186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +Wt++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k+  ++ + + +s++p+f++le
  XP_011101388.1  25 CWTEEATSTLVDAWGRRYLELNRGNLRQKDWQEVADVVnarhgHTKKTRRTDVQCKNRIDTLKKKYKTEKAKISDSNGTLTSSWPFFSRLE 115
                     8**************************************9888888999**********************99999888899******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.1E-2623116No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MDDLVESSTP QGHPPSRQVP SREDCWTEEA TSTLVDAWGR RYLELNRGNL RQKDWQEVAD  60
VVNARHGHTK KTRRTDVQCK NRIDTLKKKY KTEKAKISDS NGTLTSSWPF FSRLEFLIGS  120
NFNKHQSKLT SSAMPLASSQ STQPLSLPSP PMAVPLPYRK PLPSAMVMPV ILPQKRPTPS  180
PPVDESYFRK NYSVAAEDET EEDDGYLEGE EAEGSEDRAP EEEEVGEEGM RRLAKAIERF  240
GEIFEKVEGM KQRQMVELEK QRMQFAKDLE VQRMQLFMDT QVQLEKIKQA KRSRSSDDVY  300
S
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101388.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101388.10.0trihelix transcription factor ASIL1 isoform X3
SwissprotQ9LJG87e-37ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G9HQL71e-151A0A2G9HQL7_9LAMI; Transcription factor GT-2
STRINGMigut.M01037.1.p1e-144(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-57sequence-specific DNA binding transcription factors