PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101421.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 302aa    MW: 33938.4 Da    PI: 5.7966
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101421.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.2e-3085143259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
  XP_011101421.1  85 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSKLDPNMLVVTYSCEHNHP 143
                     69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.3E-3181145IPR003657WRKY domain
SuperFamilySSF1182901.19E-2582145IPR003657WRKY domain
SMARTSM007741.5E-3584144IPR003657WRKY domain
PROSITE profilePS5081132.00785145IPR003657WRKY domain
PfamPF031066.9E-2686143IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MTRRFNNHHK FVSELGDSEN SPENSAGESP RSAVSVDAKI ASTSSSKRSS SSSRRAIQKR  60
VVSVPIKDVQ GFRLKGEYHI TAPPSDSWAW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK  120
QVERSKLDPN MLVVTYSCEH NHPWPASRNN HHHTASASAA AAASTTTVTT SEEEEEEEEE  180
EEEEEKKPII TSNTTNQSHH QELVPDYNKF NNLCEVPLIH ASEFGWFTDF ECAANCTMLE  240
SPILTEDRIT TDNEMAMIFT MREEDESLFA DLGELPECST VFRRGMAQRE AEQRRPGLAT  300
TS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-2159145679Disease resistance protein RRS1
5w3x_D3e-2159145679Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00167DAPTransfer from AT1G29280Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101421.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101421.10.0probable WRKY transcription factor 65
TrEMBLA0A2G9HVF21e-140A0A2G9HVF2_9LAMI; Uncharacterized protein
STRINGXP_009595576.11e-108(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.13e-57WRKY DNA-binding protein 69