PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011395984.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family G2-like
Protein Properties Length: 252aa    MW: 27253.9 Da    PI: 6.4268
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011395984.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.53.4e-1478132255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvk..gLtlehvkSHLQkYRl 55 
                     ++++Wt eLH  F  +v++L   ++ +P +ile m+    gLt+++++SHLQk+R 
  XP_011395984.1  78 AKVEWTRELHMVFAGVVRSL-PVDQQVPTKILEGMGQWgwGLTRANIASHLQKFRH 132
                     689*****************.99************985337**************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-1475133IPR009057Homeodomain-like
SuperFamilySSF466891.79E-976135IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-1378134IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MDPGVWHCGE LCSGLSSPSS AVQRSEYSFD SLGTPSLQAE MHCVEPCAPA LNMLLIHDHP  60
GPHSGKEEEE ANPNAKRAKV EWTRELHMVF AGVVRSLPVD QQVPTKILEG MGQWGWGLTR  120
ANIASHLQKF RHRQGRVPGK ERECGALVSS CSTPHLDAEG WAYHDAGSAG TSPYMMMPTT  180
PPSMAPSLAF QSEGSLTDME WELGQTGDAC PPSLSRQLAQ CVQERPAALP IGLTLDHGAV  240
LRALRRRGSL VA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011395984.10.0Two-component response regulator ARR1
TrEMBLA0A087SBL00.0A0A087SBL0_AUXPR; Two-component response regulator ARR1
STRINGA0A087SBL00.0(Auxenochlorella protothecoides)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.23e-14response regulator 1