PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

XP_011397631.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella

Family

Protein Properties

Length: 142aa MW: 15733.9 Da PI: 7.8152

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011397631.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	77.2	1.9e-24	50	94	8	52
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++yF pi dAA+ +++c+TvLK+iCR++GI+RWP+Rk+ks+ XP_011397631.1 50 RSIAQYFRYPISDAAQMMDICPTVLKKICRRHGINRWPQRKLKSI 94 6799***************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.222	27	114	IPR003035	RWP-RK domain
Pfam	PF02042	2.7E-21	51	94	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence Send to blast
MPSTCERENG SFLSDVSPFD ASPSDDSAAG FLPADMSGRL DHKKGCTDIR SIAQYFRYPI 60 SDAAQMMDIC PTVLKKICRR HGINRWPQRK LKSIEKRVQE LAARAPEAGA DRASLQAKIA 120 ELQEEMHALT CGQLSLPSHC AW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011397631.1	1e-103	Protein NLP9
TrEMBL	A0A087SG89	1e-101	A0A087SG89_AUXPR; Protein NLP9
TrEMBL	A0A1D2A8H3	1e-101	A0A1D2A8H3_AUXPR; Uncharacterized protein (Fragment)
STRING	A0A087SG89	1e-102	(Auxenochlorella protothecoides)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP84	16	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	4e-15	Nin-like family protein

Link Out ? help Back to Top
Entrez Gene	23615146