PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011401233.1

Organism

Auxenochlorella protothecoides

Taxonomic ID

3075

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella

Family

CAMTA

Protein Properties

Length: 1337aa MW: 141229 Da PI: 7.7582

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011401233.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	117.2	8.4e-37	25	150	3	117
CG-1 3 kekkrwlkneeiaaiLenfek..heltlelktrpksgsliLynrkkvryfrkDGyswkkk.........kdgktvrEdhekLKvggvevlycyYa 86 k ++ wlkn+e+ +iL++ ++ l++++++ p+ g+l+L++r r+frkD ++w+kk d ktvrE+hekLKvg++e l+cyYa XP_011401233.1 25 KARSSWLKNSEVFQILQHATSglLPLSTSPPELPPGGTLFLIDRSSCRTFRKDQHQWRKKpafsphflhPDNKTVRETHEKLKVGTTERLNCYYA 119 45999*********9666511455669**************************955555444449******************** PP CG-1 87 hseenptfqrrcywlLeeelekivlvhylev 117 h++++ ++qrrcywlLe+++e vlvhyl++ XP_011401233.1 120 HADQQDQLQRRCYWLLEQQYEYAVLVHYLNA 150 **************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	41.786	19	156	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	2.5E-40	22	151	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	1.9E-36	26	149	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	5.3E-7	626	726	IPR013783	Immunoglobulin-like fold
CDD	cd00102	1.97E-5	640	726	No hit	No description
SuperFamily	SSF81296	7.87E-10	640	726	IPR014756	Immunoglobulin E-set
Pfam	PF11815	2.0E-12	803	938	IPR021771	Triacylglycerol lipase
SuperFamily	SSF52151	2.88E-24	941	1214	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase
Pfam	PF01734	3.8E-11	945	1079	IPR002641	Patatin/Phospholipase A2-related

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006629	Biological Process	lipid metabolic process
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0004806	Molecular Function	triglyceride lipase activity

Sequence ? help Back to Top
Protein Sequence Length: 1337 aa Download sequence Send to blast
MSGPAQPLPV DDAGLPEEVR EIVAKARSSW LKNSEVFQIL QHATSGLLPL STSPPELPPG 60 GTLFLIDRSS CRTFRKDQHQ WRKKPAFSPH FLHPDNKTVR ETHEKLKVGT TERLNCYYAH 120 ADQQDQLQRR CYWLLEQQYE YAVLVHYLNA PSTRTQRSVG GGLPAPDAAG AGDAPAPQRP 180 QRANRGQNSR YAHLGFDQGS GSLGADGTPR ASTTTGSDLD YEPAASGGYD VDDDAPNGGI 240 PGSARHAPGS VAWLAAQHRP ASPPGTASRL PRFPSDVSFG LGLMPEPSSA AGASLAAGVR 300 RDAGSVQGSL PPSLAEQWAE HSRRGGAAPP LEELVGHAGG LLRAQRLHSS QQQQGQGVPG 360 AFSPRGEAAQ VAWPAPGATF DDLLSQHYAA ALQRAQRADP DWEGEEGEGG ARAGAAQPSA 420 GLLMISRGLA GQGTGSFTSP PRGLHPQVSF TASEADLARS LFPQLSLGLE GVEGSGASVT 480 GPGGGGVGVQ PSTGSFTAAN GGGLDGFLAS PQRLHSRRTS SGVARLMDTW HAAAGFEHPL 540 REHLDVALGA GSGDELAGEE MRSLLKNMSI DEVDAVAALS ARGSLDRSGL WFGAGLGLHP 600 AGSTITEESS GAAEGAARSA SFEASVSGSE AAEPALRFAI EDFMPETALV LGGDKMFVTG 660 SVRSAAGLWE RHVHLKFGEE EVPAVVLNAT VLKCNVPRAP TPGRVRLCVT LGDGVPVSNT 720 VAFTYRHLRG LAALYLLLGR SLSSIALELV RHIRQAGGVL KSLSLGGRLV YRGVEIKRWH 780 GLVAAYLAYK AAQALQGIIK YLAQTGQRRT LRRRMRSASS YEEWQGLARE WDRLTGAKAK 840 PCLTACEAAE LRELSGKLRE ARLAGYLTAL RFTLRMDLKR RSGYEAVQRL LDTGIQCITL 900 PAEVEEYLSE AIQALQHIVG TPALVHRDKV SFFRELRHAY GRTALVLSGG GSFGFFHYGV 960 IKVLLNAGIL PRIVAGSSAG ALGAGILASR PVAQLAALVN MFPGDLDMNL LSNNTTPHIL 1020 RHLVVKGTAQ DGSVFVERLK RLYGADLTFA DAYAVSGRIL NVSVCAADTR EPPRVLNYLS 1080 APSVLVWSAL DLPMRELGET FNVNYSIVSQ ANPWLLPVIA AQRLLPAGLG RALETEFKHR 1140 CGQALTFFPR SPLLKMVGQP WGGHVTLAMP AAAFGAGQAA RNLSPADIAR AVREGQLRAW 1200 RALPVMHAAC AVEAAIDAAL AQLLAPSDSR DGAATAQHPL PRKIPRASLP SWLHLPALGL 1260 PPSASLEHEL GAHGSLAASL ASLDEEAGEA GGPPLADAAP DAPMSYAAGD VAAAEHVWRD 1320 LAELSTRSHS ALDCIAP

Sequence ? help Back to Top

Protein Sequence Length: 1337 aa Download sequence Send to blast

MSGPAQPLPV DDAGLPEEVR EIVAKARSSW LKNSEVFQIL QHATSGLLPL STSPPELPPG  60
GTLFLIDRSS CRTFRKDQHQ WRKKPAFSPH FLHPDNKTVR ETHEKLKVGT TERLNCYYAH  120
ADQQDQLQRR CYWLLEQQYE YAVLVHYLNA PSTRTQRSVG GGLPAPDAAG AGDAPAPQRP  180
QRANRGQNSR YAHLGFDQGS GSLGADGTPR ASTTTGSDLD YEPAASGGYD VDDDAPNGGI  240
PGSARHAPGS VAWLAAQHRP ASPPGTASRL PRFPSDVSFG LGLMPEPSSA AGASLAAGVR  300
RDAGSVQGSL PPSLAEQWAE HSRRGGAAPP LEELVGHAGG LLRAQRLHSS QQQQGQGVPG  360
AFSPRGEAAQ VAWPAPGATF DDLLSQHYAA ALQRAQRADP DWEGEEGEGG ARAGAAQPSA  420
GLLMISRGLA GQGTGSFTSP PRGLHPQVSF TASEADLARS LFPQLSLGLE GVEGSGASVT  480
GPGGGGVGVQ PSTGSFTAAN GGGLDGFLAS PQRLHSRRTS SGVARLMDTW HAAAGFEHPL  540
REHLDVALGA GSGDELAGEE MRSLLKNMSI DEVDAVAALS ARGSLDRSGL WFGAGLGLHP  600
AGSTITEESS GAAEGAARSA SFEASVSGSE AAEPALRFAI EDFMPETALV LGGDKMFVTG  660
SVRSAAGLWE RHVHLKFGEE EVPAVVLNAT VLKCNVPRAP TPGRVRLCVT LGDGVPVSNT  720
VAFTYRHLRG LAALYLLLGR SLSSIALELV RHIRQAGGVL KSLSLGGRLV YRGVEIKRWH  780
GLVAAYLAYK AAQALQGIIK YLAQTGQRRT LRRRMRSASS YEEWQGLARE WDRLTGAKAK  840
PCLTACEAAE LRELSGKLRE ARLAGYLTAL RFTLRMDLKR RSGYEAVQRL LDTGIQCITL  900
PAEVEEYLSE AIQALQHIVG TPALVHRDKV SFFRELRHAY GRTALVLSGG GSFGFFHYGV  960
IKVLLNAGIL PRIVAGSSAG ALGAGILASR PVAQLAALVN MFPGDLDMNL LSNNTTPHIL  1020
RHLVVKGTAQ DGSVFVERLK RLYGADLTFA DAYAVSGRIL NVSVCAADTR EPPRVLNYLS  1080
APSVLVWSAL DLPMRELGET FNVNYSIVSQ ANPWLLPVIA AQRLLPAGLG RALETEFKHR  1140
CGQALTFFPR SPLLKMVGQP WGGHVTLAMP AAAFGAGQAA RNLSPADIAR AVREGQLRAW  1200
RALPVMHAAC AVEAAIDAAL AQLLAPSDSR DGAATAQHPL PRKIPRASLP SWLHLPALGL  1260
PPSASLEHEL GAHGSLAASL ASLDEEAGEA GGPPLADAAP DAPMSYAAGD VAAAEHVWRD  1320
LAELSTRSHS ALDCIAP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011401233.1	0.0	Triacylglycerol lipase SDP1
TrEMBL	A0A087SR66	0.0	A0A087SR66_AUXPR; Triacylglycerol lipase SDP1
STRING	A0A087SR66	0.0	(Auxenochlorella protothecoides)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	6e-26	ethylene induced calmodulin binding protein

Link Out ? help Back to Top
Entrez Gene	23618378