PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011402167.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family ERF
Protein Properties Length: 515aa    MW: 53976 Da    PI: 6.3687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011402167.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.57.9e-09370427456
             AP2   4 kGVrwdkkrgr.WvAeIrd.pse...ng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                     +GV++ k +   W A++    s+   +g k+  ++lg++ t e Aa+a++ a+ kl+g+
  XP_011402167.1 370 RGVSREK-WSLfWDAYVDRrESStmlDGfKQEAVWLGRYPTVESAARAHDIAAIKLHGP 427
                     9***887.8888****777555578888999**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-5368440IPR001471AP2/ERF domain
PROSITE profilePS5103215.343368434IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-9369434IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-11370434IPR001471AP2/ERF domain
PfamPF008474.5E-6370426IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    Send to blast
MNGTPGSDPG GLDFLDFPSS PGSQPRSAPH HGLPEGDTPP SHPKATPGVT ANSTLDHAIH  60
KLASDDFTRL LHFEAMCETD GDLDDLSRVF QGNEGAELLD PGFFNDLMSP EDPAHGTPAR  120
NGHPGHAQPH PADFRGSMGM HHAPQQAGPA PASHTSEAYP ASPPPSTPQR GPPAPQDPPP  180
AGGVWLLDAQ ASPSPGSVPM TPMHLYPFQL QPGAMFVDPG TGQALPMQWG LAYMPGQYPY  240
TPPPMHHVVH GMPGSGAGTP SPSRKGPKRR RPSRSAHGLL TALVTQDLMS TPPEPAAPVG  300
PEVGGAEGGQ AGGTMRGVXX XXRHLRGQSA HGLLTALVTQ DLMSTPPEPA APVGPEVGGA  360
EGGQAGGTMR GVSREKWSLF WDAYVDRRES STMLDGFKQE AVWLGRYPTV ESAARAHDIA  420
AIKLHGPAAA TNYEPETYSR VLPTLSSHSE DQVVGALRKD SALAVQRTSR FRGVRRVGAR  480
AFDARLEDAL GGDGSGLNTS PSSHTSMFVP DLSSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011402167.10.0AP2-like ethylene-responsive transcription factor ANT
TrEMBLA0A087STR00.0A0A087STR0_AUXPR; AP2-like ethylene-responsive transcription factor ANT
STRINGA0A087STR00.0(Auxenochlorella protothecoides)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-10AP2 family protein