PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570084.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 353aa    MW: 38702.2 Da    PI: 6.9281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.4e-20131180255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a++k++g
  XP_012570084.1 131 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALKFRG 180
                     7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.5E-38131194IPR001471AP2/ERF domain
PfamPF008479.2E-14131180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-33131189IPR001471AP2/ERF domain
PROSITE profilePS5103225.725131188IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-22131189IPR016177DNA-binding domain
PRINTSPR003671.1E-11132143IPR001471AP2/ERF domain
CDDcd000181.29E-15139190No hitNo description
PRINTSPR003671.1E-11154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MSYPLVSAPT HDGLGQAQNE WVQVQQGYVP VSTSSNYSPR LYSSTSITSS SSPSSSSSSW  60
VVGHKRGRED DFHNTRQVAA SSHHQDFTSI HTNVADFRLP SSQGPSSSEK TLTEARRRES  120
NEEESGERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FETAEAAARA YDEAALKFRG  180
SRAKLNFPEN VTTTISPTFP PNTSSTVSVN PATHYSPAPP LQMQQPPFTQ FQGSSDLLRD  240
YYQYSQILKG SADFQGLEQW FYESQMAAIH SSSSMLSPSP PLLSFSSSSS SLPTTAFSPA  300
TQLSSASLPL FPGQQIEFFR PPEDHSHGED VGGGSGLPPS TWSDTSGYPP PSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-23130191163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115130RRRESNEEESGERRRR
2126131ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570084.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012570084.10.0ethylene-responsive transcription factor ERF110-like isoform X1
TrEMBLA0A1S3E3Y90.0A0A1S3E3Y9_CICAR; ethylene-responsive transcription factor ERF110-like isoform X1
STRINGXP_004496448.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.19e-20related to AP2 6