PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_012570459.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

NAC

Protein Properties

Length: 359aa MW: 42430 Da PI: 4.7554

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_012570459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.2	4.5e-21	11	137	7	128
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +Ptdeel++ +L +k+++++l+ + i e d++ + +Pw++ ++++a ek++yfF+ +kk+at++r r++ g+W+a +k++++k XP_012570459.1 11 LKPTDEELLKSFLYNKINNNPLPNHINILEHDLFGIkkNPWEIWEEFEAshsyCEKDLYFFTLLKKKSATSSRMVRTIGMGTWEAEDAKKDIVDK 105 68*****************999888999999754349754444112255688********************************8 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +l g kk f ++ + + +W++hey+l XP_012570459.1 106 eTCQLLGNKKRYRFE--KSGTIHDYEWILHEYKL 137 556779****8..55556699*****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	25.862	5	158	IPR003441	NAC domain
Pfam	PF02365	8.6E-13	11	137	IPR003441	NAC domain
SuperFamily	SSF101941	3.79E-23	12	157	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
MALDSLPSRN LKPTDEELLK SFLYNKINNN PLPNHINILE HDLFGIKKNP WEIWEEFEAS 60 HSYCEKDLYF FTLLKKKSAT SSRMVRTIGM GTWEAEDAKK DIVDKETCQL LGNKKRYRFE 120 KSGTIHDYEW ILHEYKLDMS LINNFSAKNY VLCRFRKNNI RNKIKMPRKS TRTKNVGQHR 180 RRKIIIERPE TTVSEKNNVW LEKNTDQRPR NQVDNGNNKI DVVNTINTSK SKYNKVEDGD 240 DYIMIKDDDD IVMNKEEEYD DLIMNKEVED GDDCIMIKDD GDIIMNKEVC DLIMNKEEED 300 GDLIMNKEEE DGDQNIIEPE LFAMQLKSVN EGCLIEEEDV PMISNDFYKY LLLENFYIK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

MALDSLPSRN LKPTDEELLK SFLYNKINNN PLPNHINILE HDLFGIKKNP WEIWEEFEAS  60
HSYCEKDLYF FTLLKKKSAT SSRMVRTIGM GTWEAEDAKK DIVDKETCQL LGNKKRYRFE  120
KSGTIHDYEW ILHEYKLDMS LINNFSAKNY VLCRFRKNNI RNKIKMPRKS TRTKNVGQHR  180
RRKIIIERPE TTVSEKNNVW LEKNTDQRPR NQVDNGNNKI DVVNTINTSK SKYNKVEDGD  240
DYIMIKDDDD IVMNKEEEYD DLIMNKEVED GDDCIMIKDD GDIIMNKEVC DLIMNKEEED  300
GDLIMNKEEE DGDQNIIEPE LFAMQLKSVN EGCLIEEEDV PMISNDFYKY LLLENFYIK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_012570459.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
STRING	XP_004497954.1	1e-174	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF557	24	133

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-12	NAC domain containing protein 83