PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_012570568.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

G2-like

Protein Properties

Length: 231aa MW: 26402.9 Da PI: 7.4418

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_012570568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.9	2.9e-10	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+vkgLt++hvkSHLQ+YR+ XP_012570568.1 1 MDVKGLTISHVKSHLQMYRS 20 9******************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.9E-9	1	23	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MDVKGLTISH VKSHLQMYRS MRSDLCKQDR TSSVHKRQSF QEHDEVNDVG VLSFLESIGK 60 ESDSLFTCRN FSPKRARIEK TSNFLTGILQ CSQRICEADP NPYTTFYDYV QDMVEQQQKG 120 IKEICVGSIW QTQPQYCNIF PMLPKQDTHL FQVTKLKEKK HVNEIGKTKS VRAEDEEIGD 180 CELSLSISLP HLSPQRSNVS SANDIKDSGF RNYMGCSTVQ NRINLDLSLA I

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_012570568.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013442314.1	1e-123	protein PHR1-LIKE 3
TrEMBL	A0A072TFN8	1e-121	A0A072TFN8_MEDTR; Myb-like DNA-binding domain, shaqkyf class protein
STRING	XP_004498202.1	1e-172	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	7e-07	G2-like family protein