PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_012571078.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 143aa MW: 16344.5 Da PI: 8.9343

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_012571078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.1	8.1e-08	66	108	8	50
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+ N+eA +++R++Kkae++ Lee+vk+L N++L +l+ XP_012571078.1 66 KRASGNKEAVKKYREKKKAETAYLEEEVKKLRLVNQQLVRKLQ 108 67888*********************************98886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0028	62	126	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.4E-11	65	127	No hit	No description
Pfam	PF07716	3.0E-9	66	108	IPR004827	Basic-leucine zipper domain
CDD	cd14686	8.89E-6	71	108	No hit	No description
SuperFamily	SSF57959	1.0E-5	71	125	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence Send to blast
MDDGNSDESS SKLSDNVLFP NQESCSNFQA SKTCTHTHTC NTLDAIHTHT CYHTHTQLFD 60 TNSMPKRASG NKEAVKKYRE KKKAETAYLE EEVKKLRLVN QQLVRKLQGK QLLEAELLRL 120 RKILAQVKGK IDSEKLPTLH PHE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in the regulation of salt stress response. Functions as a negative transcriptional regulator of salt stress acclimation response by regulating cation homeostasis (PubMed:18703123, PubMed:19248824). Regulates negatively the expression of genes contributing to ion and osmotic homeostasis during salt stress, such as the Na(+) transporter HKT1, the Na(+)/H(+) antiporter SOS1, the aquaporin PIP2-1 and the glutamine synthetase GLN1-3. In addition, targets genes with functions in plant growth and development, such as argonaute 4 (AGO4) and cyclophilin 19 (CYP19) (PubMed:19248824). {ECO:0000269\|PubMed:18703123, ECO:0000269\|PubMed:19248824}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_012571078.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by salt stress (PubMed:18703123, PubMed:19248824). Induced by osmotic stress (PubMed:19248824). {ECO:0000269\|PubMed:18703123, ECO:0000269\|PubMed:19248824}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004499761.1	1e-103	basic leucine zipper 24
Refseq	XP_004499762.1	1e-103	basic leucine zipper 24
Refseq	XP_012571078.1	1e-103	basic leucine zipper 24
Refseq	XP_012571079.1	1e-103	basic leucine zipper 24
Swissprot	Q8GTS1	2e-32	BZP24_ARATH; Basic leucine zipper 24
TrEMBL	A0A1S2Y5R0	1e-101	A0A1S2Y5R0_CICAR; basic leucine zipper 24
STRING	XP_004499761.1	1e-102	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51960.1	1e-22	basic leucine zipper 24