PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012571906.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 360aa    MW: 40069.1 Da    PI: 5.8851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012571906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12294339655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L++l+P+      k  + a++L +Av+YIk+Lq
  XP_012571906.1 294 SIAERVRRTKISERMRKLQDLVPNM----EKQTNTADMLDLAVDYIKDLQ 339
                     689*********************7....467*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.205288338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.42E-17291351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.10E-12292343No hitNo description
Gene3DG3DSA:4.10.280.101.3E-15293349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-9294339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-14294344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MNSLGSEEDL LAQKISVDST VKEEEEQQQQ VVQQQSNINI NNININDDDN NSNNYNNSAA  60
TTSHGFYQSS VMPPLPNQNL SSGMEGNYSM GVNRLQQMKS HGGNNSNLIR HSSSPAGLFS  120
QINIENGYVI MRDMGNLGAV NNSVKEAKFS TTRSLKNSSN YSSRPMSSIA EIGDKGNREN  180
NQENDVFGEN RGNDYISEYQ VDTWDDTEMM SENVGGLKRF RDNDSKQQFS GLNASSSVQN  240
ETGGGHSSSS PLAHQLSMPN TLSEMAAMEK FLHFSDSVPM KIRAKRGCAT HPRSIAERVR  300
RTKISERMRK LQDLVPNMEK QTNTADMLDL AVDYIKDLQN QVQTLSDCRA KCTCSHKQQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012571906.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486946.10.0transcription factor bHLH130-like isoform X1
RefseqXP_012571906.10.0transcription factor bHLH130-like isoform X2
TrEMBLA0A1S2XBV10.0A0A1S2XBV1_CICAR; transcription factor bHLH130-like isoform X1
TrEMBLA0A1S3EA940.0A0A1S3EA94_CICAR; transcription factor bHLH130-like isoform X2
STRINGXP_004486946.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-58bHLH family protein