PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572662.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 209aa    MW: 24056.8 Da    PI: 9.1286
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.99e-091573555
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C..........TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.as.......kapskKlsKaeiLekAveYIksLq 55
                      ++Er RR++++  +++L +llP+ ++          s+ ls  e + +A++YIk+L+
  XP_012572662.1 15 RRIVERDRRNKMKILYSKLNSLLPNyNPkfslslsLSLSEVLSLPEQVDEAINYIKNLE 73
                    5789*********************666******8777777***************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-9889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.3061072IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-71288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.6E-51573IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MGSDQPTSST TKVERRIVER DRRNKMKILY SKLNSLLPNY NPKFSLSLSL SLSEVLSLPE  60
QVDEAINYIK NLEAKVKMDK EKKEMLLRKK KRSRDCFIGA PKLPRFEIHE IGSSLQFVFT  120
CGLDNRFILY EIIRVLHEEN VEVKSVNSST FGDLLVHVVH AKVGERCLQF GGTKVSERLK  180
RFVNESTSDE EIIQPKLGDF EMGTDLWGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012572662.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027191515.12e-93transcription factor bHLH162-like
TrEMBLA0A3Q7YG285e-92A0A3Q7YG28_CICAR; transcription factor bHLH162-like
STRINGXP_004505634.11e-146(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-20bHLH family protein