PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572718.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 282aa    MW: 31406.9 Da    PI: 6.6835
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.1e-10756154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +v+ +k+L
  XP_012572718.1  7 RKTQKADREKLRRDRLNEQFVELGNILDPD----RPKNDKATILGDTVQLLKDL 56
                    6788999********************997....79**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.11E-13676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-13679IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.944656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-7756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.07E-6761No hitNo description
SMARTSM003533.3E-71262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDCTAARKTQ KADREKLRRD RLNEQFVELG NILDPDRPKN DKATILGDTV QLLKDLTSQV  60
SKLKDEHTML NEESRELTQE KNDLREEKAS LKSDIENLNN QYQLQLRTMF PWTAMDHSVM  120
MAPPSYPYPV PMPVPPGPIP MQPYPFYANQ HPAVIPNPCS TYVPFLAPNT IVEQQSTQYV  180
SPPLHPGSRS HVSGKQDSKN KSSRESRAER NEESNDVATD LELKTPGSSA DQDLSSAQKK  240
SSKSSRKESS FTEGSSLGKC SSSYSVQDSS SSSVVGSRKA SE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012572718.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944371e-155BT094437.1 Soybean clone JCVI-FLGm-24H6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505689.10.0transcription factor bHLH121
SwissprotQ9LT233e-94BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A1S2YJU90.0A0A1S2YJU9_CICAR; transcription factor bHLH121
STRINGXP_004505689.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-75bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]