PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573125.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 407aa    MW: 44870.8 Da    PI: 6.7416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.7e-12356401655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L++l+P+     +k  + +++L +AveYIk+Lq
  XP_012573125.1 356 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTSDMLDLAVEYIKDLQ 401
                     689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.837350400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-15353406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.55E-13354405No hitNo description
Gene3DG3DSA:4.10.280.101.8E-14355405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-13356406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-9356401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MESDLQQHPT MLLDHQNHHQ QQINSGLTRF KSAPSSYFSN IIDKEFYEHL FNRPSSPETE  60
RVFARFMNSL SGSGDSASAT ASASVAAVDD SLTQNLSTVQ QHPVVKEEID QQSQTMSTMN  120
NNETVAIHQL QQQQQQQSNI NNNYSSCAPP HNFYQSSGRP PLPNQMKTGR GISSNLIRHG  180
SSPAGLFSNI NIETGFAAMR GMGTMGAANS TSKEANISPT VVRLKNTPNY SVLMSSGAEI  240
GNSSNPTNNP ESEGFAETRG NDFIPGFPLS TWEDTAMISD NITGVKRYRD DDVKPFSAAE  300
IKNETGGQQP NAPLAHQMSL PNTTAELAAI EKFLQFSDSV PCKIRAKRGC ATHPRSIAER  360
VRRTKISERM RKLQDLVPNM DKQTNTSDML DLAVEYIKDL QKQVQVC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00195DAPTransfer from AT1G51140Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573125.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573125.10.0transcription factor bHLH122
TrEMBLA0A1S3EBC60.0A0A1S3EBC6_CICAR; transcription factor bHLH122
STRINGXP_004507114.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.15e-69bHLH family protein