PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012574014.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 178aa    MW: 20542.6 Da    PI: 10.478
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012574014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2323.1e-105192351
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                     +GV++  k+ +W A I++      +k+++lg+  + +eAa+++++a+ 
  XP_012574014.1 51 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVASQQEAARLYDRAAF 92
                    79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.9E-55093IPR001471AP2/ERF domain
SMARTSM003804.0E-450107IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-85195IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-653101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MQSTIKNTIL HKTLRVHLFV TYFNLHFLGP PIKRRKRHSR KPRENQEACL MRGVYFKNMK  60
WQAAIKVDKK QIHLGTVASQ QEAARLYDRA AFMCGREPNF ELPEEDKREL SKFNWEEFLT  120
VTRQTITCKK HKKGNSSGPH NKVDEPSLQR GDCDSKQGVT NFSVGGIAEL ETAASRNI
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012574014.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012574014.11e-133ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP91e-45ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A1S3EF651e-132A0A1S3EF65_CICAR; ethylene-responsive transcription factor-like protein At4g13040
STRINGXP_004510251.11e-113(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.15e-48ERF family protein