PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012575197.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ARR-B
Protein Properties Length: 260aa    MW: 30415.1 Da    PI: 6.9568
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012575197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.83.1e-20195243251
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                      r  W+++ H++Fv +v+qL G ++  Pk+il++m+v+gLt+ehv+SHLQ
  XP_012575197.1 195 FRFSWNQQFHNQFVIVVNQL-GLDNVKPKQILKIMDVPGLTREHVASHLQ 243
                     699*****************.9**************************** PP
2Response_reg43.12.3e-152912513109
                     HHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--H CS
    Response_reg  13 llrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkei.reeepklpiivvtahgeeedalealkaGakdflsKpfdp 104
                     +l+ + ++  y +v+++ +++ al+ll + +  +D+i++D +m +++++++l++i  ++  k+p+i++++  + + + ea+  Ga+d+  Kp ++
  XP_012575197.1  29 ILHAMGNQFLY-QVTTCCKPSVALNLLSQTEcsFDVIIVDTDMQELSAYDFLEHIlLFH--KIPVIFMSSDYSTNSIMEAITKGASDYWIKPLEE 120
                     55555556668.9**************888889**********************5555..6*******************************99 PP

                     HHHHH CS
    Response_reg 105 eelvk 109
                     +e  +
  XP_012575197.1 121 QEFKN 125
                     98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.4E-2114147No hitNo description
SuperFamilySSF521721.57E-1915138IPR011006CheY-like superfamily
SMARTSM004483.4E-615127IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011024.46816131IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.0E-1118126IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.36E-1339130No hitNo description
Gene3DG3DSA:1.10.10.601.9E-20192243IPR009057Homeodomain-like
SuperFamilySSF466892.87E-13192246IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-16194247IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MEFIKRLPKR FPIGLRVLVL DVDTTHHPIL HAMGNQFLYQ VTTCCKPSVA LNLLSQTECS  60
FDVIIVDTDM QELSAYDFLE HILLFHKIPV IFMSSDYSTN SIMEAITKGA SDYWIKPLEE  120
QEFKNMWKYV VKGVMINENK HEKKLNQNMN IFDMNNIFNR KRGREDEFNV PKQGIDSEDE  180
KHNHNDDYPP ATKKFRFSWN QQFHNQFVIV VNQLGLDNVK PKQILKIMDV PGLTREHVAS  240
HLQVSFVITV LYPCMLSHGW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012575197.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012575197.10.0two-component response regulator ARR14-like isoform X1
TrEMBLA0A1S3EH820.0A0A1S3EH82_CICAR; two-component response regulator ARR14-like isoform X1
STRINGXP_004514128.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-46response regulator 2