PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013619041.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family bHLH
Protein Properties Length: 133aa    MW: 15447.2 Da    PI: 7.2865
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013619041.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.0001929481230
                    HHHHHHHHHHHHHCTSCC.C CS
             HLH 12 RRdriNsafeeLrellPk.a 30
                    RR+ri +++  L+el+P+ +
  XP_013619041.1 29 RRERIAERIMALQELVPTvN 48
                    9****************954 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MEIATSGIFI SRKISHPNVI RFVDMIELRR ERIAERIMAL QELVPTVNKV SIFHLLYGSA  60
RCWIQILWRL VSCFCKWSQD THVTSKKTVA CDTNEQQSDP ISVPCLFFFY HFLSLELCCQ  120
NETLCLIISV CET
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013619041.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013619041.12e-94PREDICTED: uncharacterized protein LOC106325541 isoform X2