PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013635463.1
Organism
Brassica oleracea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family SAP
Protein Properties Length: 457aa    MW: 50459.8 Da    PI: 7.05
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013635463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP7211.2e-21914561454
             SAP   1 mssssssssseseegseggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwq 94 
                     msssss+s++ +++g  ++   ++s+g +e+ps sr+r +an+vwpePfle+la+qva+das s+  + aa+alanvf+vc+ w+avsrsd+lwq
  XP_013635463.1   1 MSSSSSASDNGDSSGGLSS-VAGRSGGVFEAPSPSRPRhSANDVWPEPFLESLAVQVAVDASLSTSPVDAAPALANVFRVCTMWQAVSRSDHLWQ 94 
                     7888887777766665444.4567789**********9899****************************************************** PP

             SAP  95 rltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpq 189
                      l++++W+rt+l++dtWr+e+iyrhrtarnf+tr y +vtl+fdp+d+de   +d+lsCrcl lsd ylaaGfadG+vrlf+l++rlhv+t++p 
  XP_013635463.1  95 LLSHQVWARTRLMHDTWRDEFIYRHRTARNFQTRSYVHVTLNFDPSDMDE---PDSLSCRCLRLSDLYLAAGFADGTVRLFHLNSRLHVRTLRPP 186
                     **********************************************8888...689*************************************** PP

             SAP 190 hrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGG 284
                      rdr+GrfsravsGivisdsrlvfat+dGdihva+i+g+g +++r+a++Gd+vndGalvdf+G+gr+wvGl+aGvpGrafhiWd+  ee++fvGG
  XP_013635463.1 187 PRDRFGRFSRAVSGIVISDSRLVFATMDGDIHVAEINGVG-SHTRTAFVGDIVNDGALVDFTGCGRYWVGLFAGVPGRAFHIWDCINEETTFVGG 280
                     **************************************88.89**************************************************** PP

             SAP 285 sltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasneayvvvdsrGvatvrrvenleevc 378
                     sltdPeavmGWh+ltelt ++Gr+r+++ etavaCt++r+ v+dlrnqgv+++e+ee+ rGliv+++da+++ayv++dsrG+a+vrrv + e+vc
  XP_013635463.1 281 SLTDPEAVMGWHTLTELTMSLGRLRISGGETAVACTRWRITVIDLRNQGVIIAEDEEQrRGLIVTGFDANDQAYVRMDSRGNAIVRRVRTQETVC 375
                     ***************************************************99887776************************************ PP

             SAP 379 rfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss....dgtihlldfga 454
                     +frv++ aqr+v+gCvn+ +al++aggv+rvW++++ ++ylyslrervgev+a+va+drhvav+ss     +tihl+dfga
  XP_013635463.1 376 EFRVSRaAQRRVMGCVNRLHALMCAGGVMRVWDVQRGGEYLYSLRERVGEVDAIVANDRHVAVASSsstaVSTIHLWDFGA 456
                     ****999********************************************************9984444468*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813833.6E-672123IPR001810F-box domain
Gene3DG3DSA:1.20.1280.504.9E-473109No hitNo description
SuperFamilySSF509788.85E-13149222IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.3E-10149223IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509788.85E-13283453IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.3E-10349454IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MSSSSSASDN GDSSGGLSSV AGRSGGVFEA PSPSRPRHSA NDVWPEPFLE SLAVQVAVDA  60
SLSTSPVDAA PALANVFRVC TMWQAVSRSD HLWQLLSHQV WARTRLMHDT WRDEFIYRHR  120
TARNFQTRSY VHVTLNFDPS DMDEPDSLSC RCLRLSDLYL AAGFADGTVR LFHLNSRLHV  180
RTLRPPPRDR FGRFSRAVSG IVISDSRLVF ATMDGDIHVA EINGVGSHTR TAFVGDIVND  240
GALVDFTGCG RYWVGLFAGV PGRAFHIWDC INEETTFVGG SLTDPEAVMG WHTLTELTMS  300
LGRLRISGGE TAVACTRWRI TVIDLRNQGV IIAEDEEQRR GLIVTGFDAN DQAYVRMDSR  360
GNAIVRRVRT QETVCEFRVS RAAQRRVMGC VNRLHALMCA GGVMRVWDVQ RGGEYLYSLR  420
ERVGEVDAIV ANDRHVAVAS SSSTAVSTIH LWDFGAP
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_013635463.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013635463.10.0PREDICTED: transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A3P6CD810.0A0A3P6CD81_BRAOL; Uncharacterized protein
STRINGBo4g135850.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]