PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013896121.1
Organism
Monoraphidium neglectum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
Family bZIP
Protein Properties Length: 463aa    MW: 46871.2 Da    PI: 5.63
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013896121.1genomeBUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.84.8e-08109154550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     +r++r   NR +A+rsR ++++ + eLe+ +  L ++ k++++ l 
  XP_013896121.1 109 RRAKRILANRQSAQRSRMKRLQHVHELENQATDLNGQIKRMQEHLA 154
                     799***********************************99998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-6105166IPR004827Basic-leucine zipper domain
PfamPF077162.3E-6107155IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.795107154IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-8109154No hitNo description
SuperFamilySSF579593.86E-8109154No hitNo description
CDDcd147033.03E-13110154No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MPLGSGFAVP QGLMPGISGL DLAALGPQSG AEMVLDAARI KAEPAPEAAA ELKGNTRGAA  60
AAAAAGSAPR SRRATAAGGD DDTDEDFDIP GGGGKTRSNA LDTAGMDPRR AKRILANRQS  120
AQRSRMKRLQ HVHELENQAT DLNGQIKRMQ EHLATEKGRA DEAAAAASAA ASAAAALQQQ  180
LSQQEGLQAA LQAQIVELRS RAAAAGLMLP NGAAVGSGVT GTGAIVSGPL SAPLLQAAQA  240
TVLQPIGLVG GMPGMGPMGV LGVVGGAGTA GVYGRSGVVP PVTLAAVASP DRQPSSSPSQ  300
QQQQQQQLAL QQHAAQQQAA LQQAQHQAMK QQAAQQQAVA QQQAAQQQQQ QQQQQQQQQQ  360
LQATQEQAQQ QPHPSAPTPV PAAPAALAPP ALQSASGSGG ASGLGVSGLQ TDLDGDFVGM  420
LSEDQGALFG SGQDGDLFGG VPLLQEHESI ASPDSVLRRT MSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127RSRMKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013896121.10.0hypothetical protein MNEG_10861
TrEMBLA0A0D2M7I60.0A0A0D2M7I6_9CHLO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1052944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-10bZIP family protein
Publications ? help Back to Top
  1. Bogen C, et al.
    Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production.
    BMC Genomics, 2013. 14: p. 926
    [PMID:24373495]