PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

XP_013901916.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium

Family

Protein Properties

Length: 218aa MW: 22419.3 Da PI: 11.0392

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_013901916.1	genome	BU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.1	3.3e-07	144	200	6	62
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + ++kNR+A+rr+R++ k i +ek++ ++ + ++L e+++l++e + l+s+ XP_013901916.1 144 LQAAREKNRLAQRRFREKQKSTITVQKEKIDGMTRQVEDLSREVQMLREENSLLRSQ 200 566699****************99999999999999999999999999999888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0037	138	203	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.0E-8	145	201	No hit	No description
CDD	cd14686	8.42E-9	148	201	No hit	No description
PROSITE pattern	PS00036	0	148	161	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-7	149	202	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MENAMLASLI GDMPRSCTPG VPQAALQAEA YRIDALQQAI LATLNGTSSG AFGQPAAAPQ 60 PTSLFSTPAP APVPELAAPH AAPLTRAFGG PAAAQAAAER SSGSRGSGAN SGGTSDTAAA 120 VAAASDDAAG GALSRGGAAA PRRLQAAREK NRLAQRRFRE KQKSTITVQK EKIDGMTRQV 180 EDLSREVQML REENSLLRSQ LVGGAALRKE LIKRRPAA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013901916.1	1e-151	hypothetical protein MNEG_5065
TrEMBL	A0A0D2MR34	1e-150	A0A0D2MR34_9CHLO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP7936	4	5

Link Out ? help Back to Top
Entrez Gene	25737942

Publications ? help Back to Top
Bogen C, et al. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics, 2013. 14: p. 926 [PMID:24373495]