PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

XP_013903199.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium

Family

Protein Properties

Length: 144aa MW: 15392.5 Da PI: 5.4111

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_013903199.1	genome	BU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.9	2.2e-08	71	128	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr++ NR +++r R+R+ +e++eL+ +++ L++eN+aL ++e+l+ a++ + XP_013903199.1 71 RVRRRREINRNSQKRIRERRNKELDELRLEAQRLSSENEALLRQVETLTLARAEVLRQ 128 56899*******************************************9888877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.3E-8	66	122	No hit	No description
SMART	SM00338	7.7E-6	67	131	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.358	69	132	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-5	69	119	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence Send to blast
MDGAERDQAG EVSGTSGSGS PKRHEAGNSR DDEAAGPSGR GNTGGRSAGG GGGGGVEGAG 60 EGGSADPADE RVRRRREINR NSQKRIRERR NKELDELRLE AQRLSSENEA LLRQVETLTL 120 ARAEVLRQVQ DLTDKWQQSI AENA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	51	GGRSAGGGG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013903199.1	7e-95	hypothetical protein MNEG_3784
TrEMBL	A0A0D2MNB2	2e-93	A0A0D2MNB2_9CHLO; Uncharacterized protein

Link Out ? help Back to Top
Entrez Gene	25736662

Publications ? help Back to Top
Bogen C, et al. Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics, 2013. 14: p. 926 [PMID:24373495]