PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_013906551.1
Organism
Monoraphidium neglectum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Selenastraceae; Monoraphidium
Family bZIP
Protein Properties Length: 620aa    MW: 63200.4 Da    PI: 6.7546
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_013906551.1genomeBUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.4e-08191240554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                     kr +r   NR++A rs +R+ +++ eLe kv++L++   +L +ele+ + 
  XP_013906551.1 191 KRVKRILANRLSAARSKERRVKYTLELEAKVQALDGDLARLSNELESTRA 240
                     8999**************************************99997665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-6187251IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082189239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-7191242No hitNo description
PfamPF001706.6E-7191238IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-7191240No hitNo description
CDDcd147032.14E-14192237No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MVAAGPLYVG GGDDALKPAA PFPGGADQQL QQLQQVQPQP FQLLQQHQQA DLVGGRPART  60
RKPTDKVALG VAVAGKRSHA GCKGKDPATV AAAAAVALER TGGETGSGCH QRRNSFTPAL  120
PSVLERDGGE DAGGMESPPR DEIGEEDEED DDSDNYSGSG RGKKGGGRRG GANGGGASGR  180
NRGELLTLDP KRVKRILANR LSAARSKERR VKYTLELEAK VQALDGDLAR LSNELESTRA  240
RAAAAQRAQA EADGRALGLQ QVLAHASAAN QALAAEVREL QRCLGLPEQL PSLTAPSLAV  300
AAPGASPPQS TQAQQDQHQQ QPVQQEQQSG QTALVIKQQQ PALLGDEDGD VEMLAELLGV  360
TGSPLPHERS GAASGVAPLS PASANTSAGA HYNHHQPHQQ LQVQGWLASM SGHSVPSSPP  420
PTGIAGRGGL HPPRPLLATL SEPLGERIAI PDEASTTPSW SGMCTTPAGA AGRASNIAAL  480
PPCLQAQPLL QQQPGLPHEP SGSQPLAFGA APQPQRPSGS QHQRSASAGS ISPLASDAGA  540
LVYGSGMAAT SFVQLKPGAV VFGAAPLQLP QQADTGGRFM TVTTPGPAGT PSTNITAGAA  600
LAPEALLGPG AVPLAPFGGL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013906551.10.0hypothetical protein MNEG_0421
TrEMBLA0A0D2N5H20.0A0A0D2N5H2_9CHLO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP678544
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.18e-13VIRE2-interacting protein 1
Publications ? help Back to Top
  1. Bogen C, et al.
    Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production.
    BMC Genomics, 2013. 14: p. 926
    [PMID:24373495]