PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015867081.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family CPP
Protein Properties Length: 112aa    MW: 12844.5 Da    PI: 8.145
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015867081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.72.7e-144483242
             TCR  2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42
                    ++++C+Ck++kClk+YC Cfa+g +C+  C+C dC+N+ e+
  XP_015867081.1 44 RHRQCHCKQTKCLKLYCVCFASGYYCNG-CNCVDCHNNVEN 83
                    5789************************.********9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011144.4E-134383IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163416.73344112IPR005172CRC domain
PfamPF036382.6E-114680IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MQSLTMRDSD RHSPTQIPLS KSNEELPKSQ AQVYVKGDNG AVKRHRQCHC KQTKCLKLYC  60
VCFASGYYCN GCNCVDCHNN VENEDARQEA VEIILERNPN AYRLKSVTFS LW
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015867081.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015867315.28e-71protein tesmin/TSO1-like CXC 6
SwissprotQ9SL708e-28TCX6_ARATH; Protein tesmin/TSO1-like CXC 6
TrEMBLA0A0D2UC942e-29A0A0D2UC94_GOSRA; Uncharacterized protein
TrEMBLA0A1U8PX411e-29A0A1U8PX41_GOSHI; protein tesmin/TSO1-like CXC 6 isoform X1
TrEMBLA0A2P5XSX41e-29A0A2P5XSX4_GOSBA; Uncharacterized protein
TrEMBLA0A2R6S1C82e-30A0A2R6S1C8_ACTCH; Protein tesmin/TSO1-like
STRINGGorai.010G108300.13e-30(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26263379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20110.14e-30Tesmin/TSO1-like CXC domain-containing protein