PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015868825.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family BES1
Protein Properties Length: 703aa    MW: 79215.2 Da    PI: 6.1652
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015868825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822137.21.7e-42802211135
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaeaagssasas 89 
                     gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V+ AL+reAGwvv +DGtt++   +g +p    ++a +  ss+ + 
  XP_015868825.1  80 GGGRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVISALAREAGWVVLPDGTTFPsrsQGPRPAavnSTAVTSSSSHMVP 174
                     68999****************************************************************96455555555422222333333344 PP

          DUF822  90 pesslq.sslkssalaspvesysaspksssfpspssldsislasaas 135
                     +++++   + ++s  +  ve  ++  k + +p  s +d  +++ ++s
  XP_015868825.1 175 QQTPTAsIRGVNSGYRNSVEYNACHIKGVYVPNASPYDLSTSTRSQS 221
                     55555556678888999999999999999999999998876664433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.5E-3881214IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.42E-184262700IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.7E-201265699IPR013781Glycoside hydrolase, catalytic domain
PfamPF013733.6E-106271690IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69302316IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69323341IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69345366IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060349357IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008429.5E-6428437IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.3E-69438460IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69511530IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69545561IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69562573IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69580603IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.3E-69620642IPR001554Glycoside hydrolase, family 14
PRINTSPR008429.5E-6671685IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008429.5E-6686700IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MATDMQKLIG TSEEDDEEEM EMDVKEEDDD DDEEDGEKHV AATQVMVGID GGMPTSSSSN  60
NNRFQQHQQI QEQVGTPGGG GGRRCRPLEE KERTKLRERH RRAITARILA GLRRHGNYNL  120
RVRADINDVI SALAREAGWV VLPDGTTFPS RSQGPRPAAV NSTAVTSSSS HMVPQQTPTA  180
SIRGVNSGYR NSVEYNACHI KGVYVPNASP YDLSTSTRSQ SSSMVRDGGE QTEIHPLISG  240
SMDTVDDKQM VEIPQKSPER DFSGTPYIPV YVMLPLGVVN MKCELVDPDG LLKQLRVLKS  300
VNVDGVVVDC WWGIVEAHAP QEYNWNGYKR LFQMVRETKL KLRVVMSFHE CGGNVGDDVC  360
IPLPHWVAEI GRSNPDIFFT DREGRRNPEC LSWGIDKERV LRGRTAIEVY FDYMRSFRIE  420
FHEFFEDGII SMIQVGLGPC GELRYPACPV KHGWRYPGIG EFQCYDQYLL KSLRKAAEAR  480
GHSLWARGPD NAGSYNSRPH ETSFFCDGGD YDGYYGRFFL NWYCKVLVDH GERVLSLAKL  540
AFDGTCISAK LSGIHWWYKT ASHAAELTAG FYNPCNRDGY AAIMAMLKKY GASLNFTCAE  600
LHLLDHAEDF QEALANPEGL VWQVLNAAWD VSIPVAKENS LPCHDRVAYN KILANAKPST  660
DPDGRHLSYF TYLRLSPHLM ERHNFMEFER FVRRMHGEAV LNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1btc_A1e-1532676987440BETA-AMYLASE
1bya_A1e-15326769811444BETA-AMYLASE
1byb_A1e-15326769811444BETA-AMYLASE
1byc_A1e-15326769811444BETA-AMYLASE
1byd_A1e-15326769811444BETA-AMYLASE
1q6d_A1e-15326769811444beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015868825.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015868825.10.0beta-amylase 7 isoform X2
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLW9S3D20.0W9S3D2_9ROSA; Beta-amylase
STRINGXP_010105937.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]