PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_015871490.1

Organism

Ziziphus jujuba

Taxonomic ID

326968

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus

Family

bZIP

Protein Properties

Length: 229aa MW: 25551 Da PI: 9.4119

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_015871490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	6.9e-14	116	174	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NRe+ArrsR R+k++i+ L++ v +L++ N++L ++l +l + ++ +e+ XP_015871490.1 116 RRLKRMISNRESARRSRMRRKMQIDDLQTQVNQLQSTNRQLSEKLIQLLECNQQILQEN 174 689********************************************999999988876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.4E-16	112	176	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.76	114	163	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-12	115	170	No hit	No description
SuperFamily	SSF57959	1.19E-11	116	171	No hit	No description
Pfam	PF00170	1.5E-12	116	174	IPR004827	Basic-leucine zipper domain
CDD	cd14702	3.47E-17	117	165	No hit	No description
PROSITE pattern	PS00036	0	119	134	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence Send to blast
MEGNGSQGLN GQSLPIPSQS PRKISLTHPI SSPLNMQAVE AVEHHHSQPL LIPVLQNPSD 60 SISFCLSSLF PKSHIHAPIH DFSPNASSIS NDTTTPFDER ASEEHQRSNS IIMTERRLKR 120 MISNRESARR SRMRRKMQID DLQTQVNQLQ STNRQLSEKL IQLLECNQQI LQENVHLKEK 180 VSSLQIIVSD LLTPLRNVGN VVTSNTASLI KAAENPKPSV SASSMHLLH

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_015871490.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015871490.1	1e-164	light-inducible protein CPRF2-like
TrEMBL	M5WVR4	6e-55	M5WVR4_PRUPE; Uncharacterized protein
STRING	EMJ10875	9e-56	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	3e-21	basic leucine-zipper 70