PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872707.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family G2-like
Protein Properties Length: 120aa    MW: 13330.2 Da    PI: 8.2113
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like53.84.4e-176352655
         G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    +AtPkti+++m+vkgLtl+h+kSHLQkYRl
  XP_015872707.1  6 EATPKTIMRTMGVKGLTLYHLKSHLQKYRL 35
                    7****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.2E-10636IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.5E-15636IPR009057Homeodomain-like
SuperFamilySSF466891.97E-6638IPR009057Homeodomain-like
PfamPF143796.1E-1283106IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MICIAEATPK TIMRTMGVKG LTLYHLKSHL QKYRLGKQSC KDSTENSKDV GITASCIAES  60
QDTGSSSTSS SRMMAQELND GYQVTEALRV QMEVQRRLHE QLEVSRFCYL FCIAATTNAA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872707.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872707.12e-85protein PHR1-LIKE 3-like isoform X1
SwissprotQ8LAJ79e-52PHL3_ARATH; Protein PHR1-LIKE 3
TrEMBLA0A2N9G4L58e-57A0A2N9G4L5_FAGSY; Uncharacterized protein
TrEMBLM5Y4K34e-57M5Y4K3_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ267607e-58(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133672126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.13e-50G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Sanz-Fernández M, et al.
    Screening Arabidopsis mutants in genes useful for phytoremediation.
    J. Hazard. Mater., 2017. 335: p. 143-151
    [PMID:28441590]