PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015872945.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 238aa    MW: 26360.5 Da    PI: 5.562
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015872945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.22.9e-1712522059
                    S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                     +r+YYrC+s+ gC+++k+vers+ dp++++itY++eHnh+
  XP_015872945.1 12 ISRGYYRCSSSkGCSARKQVERSRADPNMLVITYTSEHNHP 52
                    68*******998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.7E-11753IPR003657WRKY domain
SuperFamilySSF1182902.35E-14754IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-161254IPR003657WRKY domain
PfamPF031065.6E-141352IPR003657WRKY domain
PROSITE profilePS5081119.7841454IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MIILLYIINV YISRGYYRCS SSKGCSARKQ VERSRADPNM LVITYTSEHN HPWPTQRNAL  60
AGSTRSQPSK NNASSKSSPT TAGSHQLQKT STTSPKEEQR DNINENNNNN ASPIVTAGSN  120
STTSASIKEE IEDMEKQLEM VDDGEFSTDH HHQGFPYRPS MPPDSNHSDQ DFFADLGEIE  180
ADPLNLLFSQ AFGADHEQKG SKGLDPFNLF DWSADNNNKN NNNNNSSNSA FGEAKRGL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015872945.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872945.11e-179probable WRKY transcription factor 14
TrEMBLA0A251PIB62e-86A0A251PIB6_PRUPE; Uncharacterized protein
TrEMBLM5WIC81e-86M5WIC8_PRUPE; Uncharacterized protein
STRINGEMJ130312e-87(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-40WRKY DNA-binding protein 14