PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_015873010.1

Organism

Ziziphus jujuba

Taxonomic ID

326968

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus

Family

Dof

Protein Properties

Length: 309aa MW: 34311.1 Da PI: 7.9664

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_015873010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.6	1.7e-40	39	100	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_015873010.1 39 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 100 6899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-30	27	97	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.2E-34	41	97	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.581	43	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	45	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MSYKIFLLKI SPQEMPSHSL ENMLVNTKAQ QERKPRPHPE QALKCPRCDS TNTKFCYYNN 60 YSLTQPRYFC KSCRRYWTKG GTLRNVPVGG GCRKNKRSSS SSSSSSSKRV QDQPLTPNSN 120 PLSNLPPLTY DSNDLTLAFA RLQKQSCGQL GYDEHDLSIL GNPTSTHCDI LGNPSGINTT 180 NPAGFIDAMR NGFLESQNHY QNLYYGFGNG NIGEVENGGG GVSSEMGLHP YEEISSNAAT 240 TTAVTVTTMK QELCHGRDNE NRILWGFPWQ MNNNGGDHHG NNLGDFDTGR ESWNGMTPSW 300 HGLLNSPLM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_015873010.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015873010.1	0.0	dof zinc finger protein DOF2.1-like
TrEMBL	A0A0K8K635	1e-146	A0A0K8K635_CAJCA; Dof protein
STRING	EOY33118	1e-141	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5026	30	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-41	TARGET OF MONOPTEROS 6