PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875517.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ZF-HD
Protein Properties Length: 182aa    MW: 20160.4 Da    PI: 7.8504
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer83.32.9e-262286259
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegt.......aaalkCaACgCHRnFHRrevee 59
                    ++++YkeC++NhA+s+Gg+a+DGC+Ef++ +g  ++            C ACgCHRnFHR+e+ +
  XP_015875517.1 22 TTIKYKECRRNHAVSMGGYALDGCREFISRTGGGTKkktkkadDYFHYCDACGCHRNFHRKEMIQ 86
                    5789*************************9776655344433233356*************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047705.0E-212484IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-102490IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.8E-202584IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152322.2692683IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MVPSSSSSPP SEKSKSRISK MTTIKYKECR RNHAVSMGGY ALDGCREFIS RTGGGTKKKT  60
KKADDYFHYC DACGCHRNFH RKEMIQNGVP LGSNGEESHT AAPSSSMCLL LMGLGPFQYN  120
LVQPQPPQAG GVNWNGYQHR VFHGDDDDDD DDDEELNNNG GMVDDQQVGK KTNPKKKPKM  180
EN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173179PKKKPKM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875517.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875517.11e-136zinc-finger homeodomain protein 14-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.14e-15mini zinc finger