PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015875714.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 163aa    MW: 17948.3 Da    PI: 4.3431
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015875714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.45.3e-14108557128
             NAM  57 ewyfFskrdkkyatgkr.knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge...ktdWvmheyrl 128
                      ++fF++r+ +++ g+r  nr +k+g+Wk tg d +v+++ g +v  k+t++f + ++p++    +t+W+m+e+rl
  XP_015875714.1  10 GCHFFTRRRGTNEYGERmDNRDAKNGFWKCTGGDISVMDAAGLTVAYKQTFAFQERNSPTSFdfhSTNWTMDEFRL 85 
                     68*******99998887257899*******************************888887634449********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.2541107IPR003441NAC domain
SuperFamilySSF1019417.19E-1610106IPR003441NAC domain
PfamPF023653.6E-71285IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MYKLDLEYGG CHFFTRRRGT NEYGERMDNR DAKNGFWKCT GGDISVMDAA GLTVAYKQTF  60
AFQERNSPTS FDFHSTNWTM DEFRLSAPHA GDDGTGLELV ACRVFKARFE DHGYFPNWNT  120
DPESDSDPTL PDPVNSDTNS EPPAVSESNS SGTSSSDSAN GGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015875714.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015875714.22e-97uncharacterized protein LOC107412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.26e-10Arabidopsis NAC domain containing protein 87