PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015876730.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ARR-B
Protein Properties Length: 711aa    MW: 78634.4 Da    PI: 7.5669
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015876730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.71.9e-16339400255
         G2-like   2 prlrWtpeLHerFveaveqLGGse........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+peLH +F  av+ LG +         +A Pk ilelm+ + +tl +v+SHLQkY++
  XP_015876730.1 339 SRVVWSPELHLKFTAAVSALGDKTvsslsfdpEARPKPILELMNSPNITLRQVASHLQKYKS 400
                     79******************876533333333699*************************86 PP
2Response_reg46.12.7e-16271331107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEE.EEESTTTHHHHHHHHHT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpii.vvtahgeeedalealka 92 
                     +l+vd + + ++ l+++le+  + +v++++ ++ al +l+e++  + l++  +++p++d l++l  + +++  +p+i v++++ + ++a +al  
  XP_015876730.1  27 ILVVDNDTVSLMYLASMLEQYSF-KVTTTELASVALSILREQKeqYKLVIANMNLPDIDNLAFLHLLLKKD--IPVIqVMSSERNGNLAGKALAQ 118
                     89*********************.***************777777**********************8877..5555267799999********* PP

                     TESEEEESS--HHHH CS
    Response_reg  93 GakdflsKpfdpeel 107
                     Ga  fl Kp+  e+l
  XP_015876730.1 119 GACYFLQKPICLEDL 133
                     *********998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.13E-2023147IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.3E-2123148No hitNo description
SMARTSM004484.8E-1225137IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011027.0326141IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.7E-1327133IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.45E-1628134No hitNo description
Gene3DG3DSA:1.10.10.601.4E-19336405IPR009057Homeodomain-like
SuperFamilySSF466892.51E-11337404IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-13339400IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    Send to blast
MCLKMDGNGM NFSVTKIVPK AANGLHILVV DNDTVSLMYL ASMLEQYSFK VTTTELASVA  60
LSILREQKEQ YKLVIANMNL PDIDNLAFLH LLLKKDIPVI QVMSSERNGN LAGKALAQGA  120
CYFLQKPICL EDLKFVWQHM YRKIRKPMKE VCEANIENKM NHGNDSRGIK IKETDNVSRA  180
PEKGNMIKEP GGVSGRPRCQ GIIIKEVNHA TRPPNYEGGK EVGGVSGSAT VCNLDGIQNR  240
YMVTDPNGKK KQFEGHQVSL VNENHVKVVQ NSCTKGSITT EQKKQEGLKT RRQIDDEEQQ  300
QQGKRTKVNS EQKSSQSLKT NEEEGERKDD SSSSNEKRSR VVWSPELHLK FTAAVSALGD  360
KTVSSLSFDP EARPKPILEL MNSPNITLRQ VASHLQKYKS QVQKINETST TDFLPVSKST  420
SSYSKAEFPS LLERPSALAS PLGQRSLSFG GRGSTQFTAP KSLAQPGPSL SSVINNHRTS  480
NLNSGQMDIS RTLNLYPTNN NSNEVHIENH SMLQRSNQIR KTSSFNSNNF VNENMKEIQP  540
YQIQGSVSQV SETNLPNLSY VIPEAASPCI SADMSQLLNV PPYVNHAQEF APDLAAPFNS  600
QNQNQLSAGA MGRTDVLQSQ PAQMTLGNAT NIEKSPNDFF GGSQNVDPTP EQVAASGSNQ  660
NQSLLDYANL LKFLEDDLEY NCLDSAPDIG DIDHYCKWLE QTLHGKSKDP Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015876730.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015876730.10.0two-component response regulator ARR11 isoform X1
RefseqXP_015876735.10.0two-component response regulator ARR11 isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.12e-26pseudo-response regulator 6