PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015876732.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ARR-B
Protein Properties Length: 710aa    MW: 78520.3 Da    PI: 7.5669
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015876732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.71.9e-16338399255
         G2-like   2 prlrWtpeLHerFveaveqLGGse........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      r++W+peLH +F  av+ LG +         +A Pk ilelm+ + +tl +v+SHLQkY++
  XP_015876732.1 338 SRVVWSPELHLKFTAAVSALGDKTvsslsfdpEARPKPILELMNSPNITLRQVASHLQKYKS 399
                     79******************876533333333699*************************86 PP
2Response_reg51.45.8e-18271321107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd + + ++ l+++le+  + +v++++ ++ al +l+e++  + l++  +++p++d l++l  + +++  +p+i+++++ + ++a +al  G
  XP_015876732.1  27 ILVVDNDTVSLMYLASMLEQYSF-KVTTTELASVALSILREQKeqYKLVIANMNLPDIDNLAFLHLLLKKD--IPVILMSSERNGNLAGKALAQG 118
                     89*********************.***************777777**********************8877..********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a  fl Kp+  e+l
  XP_015876732.1 119 ACYFLQKPICLEDL 132
                     ********998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.5E-2323147No hitNo description
SuperFamilySSF521726.26E-2323146IPR011006CheY-like superfamily
SMARTSM004484.9E-1625136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011030.03426140IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.5E-1527132IPR001789Signal transduction response regulator, receiver domain
CDDcd001566.29E-1828133No hitNo description
Gene3DG3DSA:1.10.10.601.4E-19335404IPR009057Homeodomain-like
SuperFamilySSF466892.51E-11336403IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-13338399IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    Send to blast
MCLKMDGNGM NFSVTKIVPK AANGLHILVV DNDTVSLMYL ASMLEQYSFK VTTTELASVA  60
LSILREQKEQ YKLVIANMNL PDIDNLAFLH LLLKKDIPVI LMSSERNGNL AGKALAQGAC  120
YFLQKPICLE DLKFVWQHMY RKIRKPMKEV CEANIENKMN HGNDSRGIKI KETDNVSRAP  180
EKGNMIKEPG GVSGRPRCQG IIIKEVNHAT RPPNYEGGKE VGGVSGSATV CNLDGIQNRY  240
MVTDPNGKKK QFEGHQVSLV NENHVKVVQN SCTKGSITTE QKKQEGLKTR RQIDDEEQQQ  300
QGKRTKVNSE QKSSQSLKTN EEEGERKDDS SSSNEKRSRV VWSPELHLKF TAAVSALGDK  360
TVSSLSFDPE ARPKPILELM NSPNITLRQV ASHLQKYKSQ VQKINETSTT DFLPVSKSTS  420
SYSKAEFPSL LERPSALASP LGQRSLSFGG RGSTQFTAPK SLAQPGPSLS SVINNHRTSN  480
LNSGQMDISR TLNLYPTNNN SNEVHIENHS MLQRSNQIRK TSSFNSNNFV NENMKEIQPY  540
QIQGSVSQVS ETNLPNLSYV IPEAASPCIS ADMSQLLNVP PYVNHAQEFA PDLAAPFNSQ  600
NQNQLSAGAM GRTDVLQSQP AQMTLGNATN IEKSPNDFFG GSQNVDPTPE QVAASGSNQN  660
QSLLDYANLL KFLEDDLEYN CLDSAPDIGD IDHYCKWLEQ TLHGKSKDPQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015876732.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015876732.10.0two-component response regulator ARR11 isoform X3
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.13e-28pseudo-response regulator 6