PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015880381.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family NAC
Protein Properties Length: 216aa    MW: 24665.6 Da    PI: 8.3528
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015880381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.79.6e-23131493128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk..kvka.eek....ewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     +G rF+Ptd++lv +yL ++v+g +++   + +++d++ k ePw++ +  + ++ +++    ++yf++k +k++++gkr nr++ sg+Wk + ++
  XP_015880381.1  13 KGWRFRPTDDDLVGYYLLREVTGCPFSRVGIAHDFDVFgKKEPWEIWStfRSENdHDNpdpdDLYFYTKPKKNTPKGKRFNRKVGSGTWKGQDSS 107
                     79***********************9998999999987367*****742322222222445588******************************* PP

             NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +e++++    ++ ++g +k + +  ++++k +  + +m ey l
  XP_015880381.1 108 TEIYASsaddNDIVIGFRKRFHYE-NKQSKEHDGSRIMFEYCL 149
                     ****9877766667*******987.66667789999****987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.58211172IPR003441NAC domain
SuperFamilySSF1019413.66E-2712172IPR003441NAC domain
PfamPF023659.6E-1413148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MELPAPVPVP SLKGWRFRPT DDDLVGYYLL REVTGCPFSR VGIAHDFDVF GKKEPWEIWS  60
TFRSENDHDN PDPDDLYFYT KPKKNTPKGK RFNRKVGSGT WKGQDSSTEI YASSADDNDI  120
VIGFRKRFHY ENKQSKEHDG SRIMFEYCLA GSLSHCITGP DNDFVLCRIR KKSSSENKNK  180
RKNSMIIGCD DDLVPPPLKN QKTNINNGNN IGYSSC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015880381.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015880381.11e-161NAC domain-containing protein 41-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.16e-15NAC domain containing protein 41