PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015883014.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 361aa    MW: 40489.3 Da    PI: 4.6826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015883014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.42.1e-14116158349
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 
                     ykGVr++k +g+++AeIrdp    +r  r +lg++ taeeAa a+ + 
  XP_015883014.1 116 YKGVRRRK-WGKYAAEIRDP----IRgVRLWLGTYNTAEEAAFAYQKK 158
                     9****998.**********7....246***************999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.08E-16114160IPR016177DNA-binding domain
CDDcd000182.07E-20114155No hitNo description
PROSITE profilePS5103218.479115176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-20115159IPR001471AP2/ERF domain
SMARTSM003801.7E-17115182IPR001471AP2/ERF domain
PRINTSPR003677.7E-9116127IPR001471AP2/ERF domain
PfamPF008472.2E-8116157IPR001471AP2/ERF domain
PRINTSPR003677.7E-9138154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MPGLKNQLSI QDMYCNKGNS KKPIKAAHSN SMKRIRIIYN DPYATDSSSE DDEKQDVSRY  60
RFVRSKRFVS EILIPGSPFE SCPASVPHIN NSDGVKIGTN TKFDESKKLR KSSSMYKGVR  120
RRKWGKYAAE IRDPIRGVRL WLGTYNTAEE AAFAYQKKKS EFDAVQLFEK EKSGFEILKT  180
AEKAKSESDQ VMEVIDSDCE SMHLQEQSKC SSEDSAGATV SLKETENVFS LPSPSSVLDI  240
SSAAPHGSKR EMSIKKECNV EFDPAEGGYM EPFNGEEQSI PDLLEEPVAL TLSSHELNFG  300
FGENALFEIN FDKIFDDIDT IADYPLCNEE NVEAVNLPSL DFDFGKQSLA WLDESLNVTL  360
P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116122KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015883014.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015883014.10.0ethylene-responsive transcription factor CRF1
TrEMBLW9RJN81e-106W9RJN8_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010094763.11e-107(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-27ERF family protein