PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015886023.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 189aa    MW: 20787.2 Da    PI: 4.6643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015886023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-191767155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  XP_015886023.1 17 SVYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 67
                    78*****999.**********8...325***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.8E-121767IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-231776IPR016177DNA-binding domain
CDDcd000181.07E-231775No hitNo description
Gene3DG3DSA:3.30.730.103.2E-321876IPR001471AP2/ERF domain
SMARTSM003805.4E-391881IPR001471AP2/ERF domain
PROSITE profilePS5103223.8681875IPR001471AP2/ERF domain
PRINTSPR003673.9E-101930IPR001471AP2/ERF domain
PRINTSPR003673.9E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEEPNTSGSH GGGAATSVYR GVRKRKWGKW VSEIREPGTK TRIWLGSFET PEMAAAAYDV  60
AALHFRGRDA RLNFPQLVNS LPKPLSSNPD DVRMAAHEAA LRLRSSSASP VVADVADYGG  120
SSSGSNMGPI TVRLSPSQIQ AINESPLDSP KMWMQMAEAL TMEESLMFSN ETNEENEWED  180
MQNESLWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-171980668ATERF1
3gcc_A2e-171980668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015886023.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886023.11e-137ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I28e-64ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A2N9GI644e-84A0A2N9GI64_FAGSY; Uncharacterized protein
STRINGGorai.005G116500.11e-84(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-62ERF family protein