PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015886558.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bHLH
Protein Properties Length: 164aa    MW: 18601.5 Da    PI: 5.422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015886558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.000192173954
                    TCHHHHHHHHHHHHHH CS
             HLH 39 sKaeiLekAveYIksL 54
                    +Ka+i + A++YI++L
  XP_015886558.1  2 DKASIIKDAIDYIQQL 17
                    8**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.6E-7133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-5132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508888.607117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDKASIIKDA IDYIQQLHEQ ERRIQAEIME LESGKLKKNP GGYDFEQELP VLLRSKKKKT  60
EQFYDSGGSR TSPIEVLDLR VTYMGDRTLV VSLTCSKKTD TMVKICEVFE SLKLKIITAN  120
ITAFSGRLLK TVFVEADEEE KEQLKIKIET AIAALNDPQS PMSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015886558.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015886558.11e-117transcription factor bHLH35
SwissprotQ2HIV93e-57BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A059CQV22e-99A0A059CQV2_EUCGR; Uncharacterized protein
TrEMBLA0A059CRK72e-99A0A059CRK7_EUCGR; Uncharacterized protein
STRINGXP_010048564.11e-100(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33893369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.18e-52bHLH family protein