PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015888574.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family G2-like
Protein Properties Length: 218aa    MW: 24053 Da    PI: 5.7462
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015888574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.35.4e-1618462755
         G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                    AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_015888574.1 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46
                    9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-151847IPR009057Homeodomain-like
SuperFamilySSF466892.69E-61846IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-111847IPR006447Myb domain, plants
PfamPF143792.4E-2480126IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MIALWMPLHN LVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKFL PESPADGKGS  60
KDEKKGSGDS LSGSDSSTGV QINEALKMQM EVQKRLHEQL EVQRQLQMRI EAQGKYLQKI  120
IEEQQKLGGV IKASESIPSA EDNKQEPSES ETPADTSAGP SFPGKRQRTD DGLPDESTSS  180
PVQPKADQEN SLVDQWNQDL YENDALFGSN SEGVKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015888574.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015888574.11e-159myb family transcription factor PHL7-like isoform X3
SwissprotQ9SJW05e-57PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A251N5I01e-108A0A251N5I0_PRUPE; Uncharacterized protein
STRINGEMJ036011e-100(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-48G2-like family protein