PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015889197.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family HRT-like
Protein Properties Length: 731aa    MW: 79950.5 Da    PI: 9.6184
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015889197.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like47.53.1e-15280310131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGv+l   svC+r Pv+gR RC+eHKGm+i
  XP_015889197.1 280 ICGVALTLDSVCTRAPVEGRMRCAEHKGMKI 310
                     8****************************97 PP
2HRT-like44.32.9e-14363391129
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 
                     iCG++l dGs+ +rq+v+g+KRC eHKG+
  XP_015889197.1 363 ICGFTLTDGSPSRRQAVQGNKRCDEHKGR 391
                     8***************************7 PP
3HRT-like46.65.9e-15428457130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     iCG+++e+G+ Ckr+Pv+g+KRC++H GmR
  XP_015889197.1 428 ICGATTENGTACKREPVEGNKRCRQHSGMR 457
                     8****************************9 PP
4HRT-like43.17.1e-14498527130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889197.1 498 TCGATTNNGTACKREPVEGNKRCRKHSGMR 527
                     7****************************9 PP
5HRT-like45.21.6e-14562591130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889197.1 562 TCGATTNNGTACKREPVEGNKRCRQHSGMR 591
                     7****************************9 PP
6HRT-like49.66.4e-16626655130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CGv++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889197.1 626 TCGVTTNNGTACKREPVEGNKRCWQHSGMR 655
                     7****************************9 PP
7HRT-like43.26.7e-14696725130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ C+r+Pv+g+ RC++H GmR
  XP_015889197.1 696 TCGATTRNGTACTRKPVPGNRRCWQHTGMR 725
                     7****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 731 aa     Download sequence    Send to blast
MSQSQQEEEM VGSDSTAVVV SRSKREDRTR AKHGTKFSQW KILVGPCDWE AYSLGKDGAE  60
RYRFHNLPGI STPGVYELAI PLSQTGGLGR NVAKLDPEGM VVVYIGHAED VRTRLQHYGR  120
TGAHLGSGCS TAHPTPCLPK GPGLFEEILS RGYPIMFRWA PMQSKSDAQQ TETRLLDKFD  180
YAWNKRINGS RRPDDILEKL VKISSGCNHS PTIDRRLLSW SLGQMGIRIK AAKSLATENN  240
FNACADEERP NILSRVFKFG RSRPRSVLDT SGITKWNNVI CGVALTLDSV CTRAPVEGRM  300
RCAEHKGMKI NELTTVRISN SNGIYGSQYG VIDSSKSDGH GKSGFKHGTV TVEYHVSKSF  360
SPICGFTLTD GSPSRRQAVQ GNKRCDEHKG RGIGKSNSRL VSTEEKPLYT PDVFESNSGD  420
TSEYDNIICG ATTENGTACK REPVEGNKRC RQHSGMRAGG DTSEYYNNSA AIRNHGRLKY  480
EVSSSRINQN MYGIGVVTCG ATTNNGTACK REPVEGNKRC RKHSGMRAGG DTLAAICNHG  540
RLEDEVLSSR INQNKNGIGV VTCGATTNNG TACKREPVEG NKRCRQHSGM RAGGDTSAAI  600
CNHGRLEDEV LSSRINQNKN GRGVVTCGVT TNNGTACKRE PVEGNKRCWQ HSGMRAGGDT  660
SEYYNNSAAI RNHGRLKYEV SSSRINQNMY GIGVVTCGAT TRNGTACTRK PVPGNRRCWQ  720
HTGMRAGTSY Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015889197.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015889197.10.0protein EFFECTOR OF TRANSCRIPTION 2-like isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.19e-95effector of transcription2