PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015889198.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family HRT-like
Protein Properties Length: 725aa    MW: 79083.6 Da    PI: 9.4446
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015889198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like47.53.1e-15280310131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGv+l   svC+r Pv+gR RC+eHKGm+i
  XP_015889198.1 280 ICGVALTLDSVCTRAPVEGRMRCAEHKGMKI 310
                     8****************************97 PP
2HRT-like44.42.9e-14363391129
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGm 29 
                     iCG++l dGs+ +rq+v+g+KRC eHKG+
  XP_015889198.1 363 ICGFTLTDGSPSRRQAVQGNKRCDEHKGR 391
                     8***************************7 PP
3HRT-like44.52.7e-14428457130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     iCG+++e+G+ Ckr+Pv+g+KRC++H GmR
  XP_015889198.1 428 ICGATTENGTACKREPVEGNKRCRKHSGMR 457
                     8****************************9 PP
4HRT-like45.21.5e-14492521130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889198.1 492 TCGATTNNGTACKREPVEGNKRCRQHSGMR 521
                     7****************************9 PP
5HRT-like47.13.9e-15556585130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CGv++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889198.1 556 TCGVTTNNGTACKREPVEGNKRCRQHSGMR 585
                     7****************************9 PP
6HRT-like47.62.9e-15620649130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ Ckr+Pv+g+KRC++H GmR
  XP_015889198.1 620 TCGATTNNGTACKREPVEGNKRCWQHSGMR 649
                     7****************************9 PP
7HRT-like43.26.6e-14690719130
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                     +CG+++++G+ C+r+Pv+g+ RC++H GmR
  XP_015889198.1 690 TCGATTRNGTACTRKPVPGNRRCWQHTGMR 719
                     7****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    Send to blast
MSQSQQEEEM VGSDSTAVVV SRSKREDRTR AKHGTKFSQW KILVGPCDWE AYSLGKDGAE  60
RYRFHNLPGI STPGVYELAI PLSQTGGLGR NVAKLDPEGM VVVYIGHAED VRTRLQHYGR  120
TGAHLGSGCS TAHPTPCLPK GPGLFEEILS RGYPIMFRWA PMQSKSDAQQ TETRLLDKFD  180
YAWNKRINGS RRPDDILEKL VKISSGCNHS PTIDRRLLSW SLGQMGIRIK AAKSLATENN  240
FNACADEERP NILSRVFKFG RSRPRSVLDT SGITKWNNVI CGVALTLDSV CTRAPVEGRM  300
RCAEHKGMKI NELTTVRISN SNGIYGSQYG VIDSSKSDGH GKSGFKHGTV TVEYHVSKSF  360
SPICGFTLTD GSPSRRQAVQ GNKRCDEHKG RGIGKSNSRL VSTEEKPLYT PDVFESNSGD  420
TSEYDNIICG ATTENGTACK REPVEGNKRC RKHSGMRAGG DTLAAICNHG RLEDEVLSSR  480
INQNKNGIGV VTCGATTNNG TACKREPVEG NKRCRQHSGM RAGGDTSAAI CNHGRLEDEV  540
LSSRINQNKN GRGVVTCGVT TNNGTACKRE PVEGNKRCRQ HSGMRAGGDT SDAICNHGRL  600
EDEVLSSRVN QNKNGIGVVT CGATTNNGTA CKREPVEGNK RCWQHSGMRA GGDTSEYYNN  660
SAAIRNHGRL KYEVSSSRIN QNMYGIGVVT CGATTRNGTA CTRKPVPGNR RCWQHTGMRA  720
GTSYY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015889198.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015889198.10.0protein EFFECTOR OF TRANSCRIPTION 2-like isoform X3
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.11e-91effector of transcription2