PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891440.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 134aa    MW: 15260.7 Da    PI: 7.8477
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-181464255
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +g++++eIrd      ++ +r++lg+f taeeAa+a+++a+ +++g
  XP_015891440.1 14 RYRGVRKRP-WGKFASEIRD----SaRHgTRVWLGTFNTAEEAARAYDRAAFAMRG 64
                    6********.**********....33236*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.38E-271473No hitNo description
SuperFamilySSF541714.97E-231474IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.1E-311473IPR001471AP2/ERF domain
SMARTSM003802.0E-351478IPR001471AP2/ERF domain
PfamPF008476.3E-141464IPR001471AP2/ERF domain
PROSITE profilePS5103223.3141472IPR001471AP2/ERF domain
PRINTSPR003676.1E-121526IPR001471AP2/ERF domain
PRINTSPR003676.1E-123854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MEHNRKEEEQ KDVRYRGVRK RPWGKFASEI RDSARHGTRV WLGTFNTAEE AARAYDRAAF  60
AMRGQLAILN FPHEHGLPGF SSSGSSSSSS SSSSSSRSVE KNRAEQGNQV FVFEYLDDKL  120
LEELLDFDNQ SKRD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-371412014114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891440.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891440.25e-95ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC54e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A3Q8TD921e-53A0A3Q8TD92_FRAAN; Transcription factor ERF81
STRINGXP_004292207.15e-52(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.12e-26ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]