PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891444.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 192aa    MW: 21183.4 Da    PI: 10.6543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891444.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-204595155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a++ a+++l+g
  XP_015891444.1 45 THFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDDAARSLRG 95
                    589*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.72E-1945102No hitNo description
PfamPF008473.6E-134595IPR001471AP2/ERF domain
SMARTSM003806.9E-3446109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-3046103IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2146103IPR016177DNA-binding domain
PROSITE profilePS5103222.23446103IPR001471AP2/ERF domain
PRINTSPR003672.4E-104758IPR001471AP2/ERF domain
PRINTSPR003672.4E-106985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MAVDTLQLRK ASLVVAGPPM EPPHPPPSLA SSKDAPLFRG TTKETHFRGV RKRPWGRFAA  60
EIRDPWKKTR KWLGTFDTAE EAARAYDDAA RSLRGPKAKT NFGHGGLAGT TRAPPPPSLG  120
IVGGGEIFGD AMQLWRQPMY FPGSVTGGAP VRSEYKGYKL ENVDVVVNEQ EKKMRKEKKP  180
FLFDLNLPAP LF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-19471041573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891444.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891444.11e-138ethylene-responsive transcription factor 4-like
TrEMBLW9RBQ96e-77W9RBQ9_9ROSA; Ethylene-responsive transcription factor 3
STRINGXP_010100082.11e-77(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-23ethylene responsive element binding factor 3