PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015892615.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family C2H2
Protein Properties Length: 261aa    MW: 27509.3 Da    PI: 7.6101
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015892615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00064104126123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F +   L  H  +H
  XP_015892615.1 104 YKCSVCNKAFASYQALGGHKASH 126
                     9***********99998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.011104126IPR015880Zinc finger, C2H2-like
PfamPF139126.2E-13104128IPR007087Zinc finger, C2H2
SuperFamilySSF576674.3E-10104126No hitNo description
PROSITE profilePS5015710.554104131IPR007087Zinc finger, C2H2
PROSITE patternPS000280106126IPR007087Zinc finger, C2H2
SuperFamilySSF576674.3E-10167194No hitNo description
PfamPF139121.6E-13171196IPR007087Zinc finger, C2H2
SMARTSM003550.18172194IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.328172194IPR007087Zinc finger, C2H2
PROSITE patternPS000280174194IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MALEALKSPS TAPPFSFEDM ENNNHSRFHE PWMKRKRSRR PRFDDDDVDN HNTPSEEEYL  60
ALCLIMLARG HGGPPPKQDN RDAPAPASVA SQLPPQPPAL KLSYKCSVCN KAFASYQALG  120
GHKASHRKSS ASSTSDAAAA AADNNPSTST TTASTTTAAA AGGAAPTSGR THECSICHKT  180
FPTGQALGGH KRCHYDGASG NSGASGNSSL TLSEGGASSQ SLSQSHRGFD LNLPAFPEFL  240
DVGRRIQLPG DQEAESPLPL K
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015892615.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015892615.10.0zinc finger protein ZAT10, partial
TrEMBLA0A2P5DNE42e-89A0A2P5DNE4_PARAD; Zinc finger transcription factor
STRINGXP_008236445.14e-80(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13273291
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.17e-53salt tolerance zinc finger