PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015896457.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 215aa    MW: 24399.8 Da    PI: 4.1308
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015896457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.62.4e-0824523159
                    T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59
                     C  +k+vers+++p++++itY+ eH h 
  XP_015896457.1 24 ICGKRKQVERSSSNPEIFIITYTAEHIHA 52
                    599***********************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031061.1E-42551IPR003657WRKY domain
PROSITE profilePS5081111.4052554IPR003657WRKY domain
SuperFamilySSF1182907.06E-52554IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-62554IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MKICKLGSAL SLCLSFNGEL GLAICGKRKQ VERSSSNPEI FIITYTAEHI HAHPVRRNSL  60
SGSSRSKFPA SSKHKSDKKN SCLVESIEDD ELVQTVRVKK EEEQEQVVDV EIERNEIEMM  120
DMMLSHEGTI PSSSSEDFVD NKQTSLEPDM DSRFLDDQFF SDGFVDAWFL DQPAKLSSLD  180
DSLNSNNEDY STWGLSNLDR FLNEAEEEEE DDDEE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015896457.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015896457.11e-156probable WRKY transcription factor 27
TrEMBLA0A251PA294e-28A0A251PA29_PRUPE; Uncharacterized protein
STRINGXP_008239089.11e-29(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.17e-13WRKY DNA-binding protein 27