PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015897288.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 323aa    MW: 37104.6 Da    PI: 8.7438
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015897288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.62.2e-22140200259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqK++ ++++pr+Y+rCt++   gC+++k+++r + +p +  +tY g+H+++
  XP_015897288.1 140 NDGQAWRKYGQKKILNAKYPRHYFRCTYKhdqGCEATKQIQRIQVNPPMYRTTYFGHHTCR 200
                     8***************************99999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-22131200IPR003657WRKY domain
SuperFamilySSF1182907.19E-22133200IPR003657WRKY domain
PROSITE profilePS5081119.359134197IPR003657WRKY domain
SMARTSM007741.1E-34139201IPR003657WRKY domain
PfamPF031061.2E-22140200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MEMSSSRPEN LTSSTILKRL NDELIEGRDF ANRLLSVLAS SDGSKSAEDL LVKIVKSFSN  60
TLSLLNVKEC DNNSDSVISQ IRAADLPRLD ARKSQDHSRE SFRRRSATPP TKKLDRRGCY  120
DRRRTSTSRS WKRYTPNLIN DGQAWRKYGQ KKILNAKYPR HYFRCTYKHD QGCEATKQIQ  180
RIQVNPPMYR TTYFGHHTCR NLHQDPELIL DSISPSENSI FISFDGTNLK NKQDHFPFVS  240
SVPSTKQGFK EEIIKYDANL QHNQSLLSDY FVSSDLAASA EAFPSRRSMP VMLTSNLESD  300
NGDVIDGRVM DYDDDFCLDI FQF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-22139200869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015897288.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015897288.10.0probable WRKY transcription factor 70
TrEMBLA0A2P5CHL38e-77A0A2P5CHL3_PARAD; WRKY domain containing protein
STRINGXP_010093537.17e-75(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-35WRKY DNA-binding protein 70