PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015898927.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family G2-like
Protein Properties Length: 229aa    MW: 25808 Da    PI: 5.5987
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015898927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.71.8e-11203227125
         G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                     k+r++Wt++LHerFve+v++LGG++
  XP_015898927.1 203 KQRIKWTQDLHERFVECVNSLGGAD 227
                     79*********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-8201227IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEMAPAAAGM GMESSSSLAA ASAICTAAAQ SESNYMVDFH QQHNIHIDQI YDQYQDHNHD  60
FDDHHHLFFS ELLEEYHDLQ IPSCQSSGKL AALHHHHQQN QSNYEYYGLL YGSCEKYFHK  120
YSSSNNLPNR SALSTLYYKQ DKFLDNGDEE PVLLDPRVQG HDQQNSCSSD KLPEKVCSKS  180
NNDGDVISAA NSASSSRRAS RSKQRIKWTQ DLHERFVECV NSLGGADSE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015898927.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015898927.11e-171uncharacterized protein LOC107432326
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.28e-10G2-like family protein