PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015899561.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 67aa    MW: 8025.48 Da    PI: 9.9574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015899561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.41.4e-189462259
                    EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                     sYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+
  XP_015899561.1  9 WSYYRCTHPTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 46
                    59***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.2E-9247IPR003657WRKY domain
SuperFamilySSF1182901.06E-14947IPR003657WRKY domain
PfamPF031064.4E-131046IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-151046IPR003657WRKY domain
PROSITE profilePS5081115.1011048IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MKKFLFISWS YYRCTHPTCN VKKQVQRLSK DTSIVVTTYE GIHNHPCEKL METLTPLLKQ  60
MQFLSRF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015899561.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015899582.19e-36probable WRKY transcription factor 24
SwissprotQ8VWQ43e-30WRK56_ARATH; Probable WRKY transcription factor 56
TrEMBLA0A059C0121e-33A0A059C012_EUCGR; Uncharacterized protein
STRINGXP_008344897.19e-35(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.11e-32WRKY DNA-binding protein 56