PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015901603.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family bHLH
Protein Properties Length: 116aa    MW: 12813.7 Da    PI: 10.1919
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015901603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-1140801055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_015901603.1 40 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 80
                    9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-152996IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.8813079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-133589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-113685IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.28E-123984No hitNo description
PfamPF000102.3E-84080IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
ELSEGVTPSS SPKGTAALNL NGKARATKGS ATDPQSVYAR KRREKINERL RILQNLVPNG  60
TKVDISTMLE EAVHYVKFLQ LQIKLLSSDD LWMYAPIAYN GTNIGFDLRI ANPKPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13944RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015901603.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088156.11e-61transcription factor bHLH139-like
SwissprotQ7XHI92e-55BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A067L7P37e-61A0A067L7P3_JATCU; Uncharacterized protein
STRINGMigut.B00443.1.p1e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.17e-58bHLH family protein